Software:Article Title: Solid tumor immunotherapy using NKG2D-based adaptor CAR T cells
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER SFG NKG2D/Dap10(Tr.)-CD28 CD3z This manuscript N/A RFP/ffLuc This lab (Lamprecht et al., 201051) Lamprecht et al., 201051 RD114 Gift of Prof. M. Collins, University College London N/A pEQ-Pam3 Gift of Dr. M. Pulé, University College London N/A Software and algorithms FACSDiva BD Biosciences N/A CytExpert Beckman Coulter N/A FlowJo FlowJo, LCC, BD Biosciences N/A Seahorse Analytics Program Agilent Technologies N/A MARS Data Analysis Software BMG Labtech N/A BMG Labtech Control Software BMG Labtech N/A GraphPad Prism version 5.0, 6.0 and 7.0 GraphPad software N/A Excel for Mac 2011 Microsoft N/A Living Image Software PerkinElmer N/A R (version 4.2.1) R Core Team N/A Fiji Fiji Downloads N/A Gene Designer Atum Incorporated N/A Signal Predict DTU Health Tech N/A Tandem Repeats Finder Benson, 199952 Benson, 199952 Spice Roederer et al., 201153 Roederer et al., 201153 Salmon (version 1.9.0) Patro et al., 201754 Patro et al., 201754 R package tximeta Love et al., 2019 PPR: PPR93747 R package trimmomatic Bolger et al., 201455 Bolger et al., 201455 HISAT Kim et al., 201556 Kim et al., 201556 HTSeq Anders et al., 201557 Anders et al., 201557 DESeq2 Love et al., 201458 Love et al., 201458 Ensembl Martin et al., 202359 Martin et al., 202359 MSigDB Liberzon et al., 201560 Liberzon et al., 201560 GSEA Subramanian et al., 200561 Subramanian et al., 200561 R package pheatmap Raivo Kolge, 2019 N/A R package ggplot2 Hadley Wickham, 2016 N/A ClustVis Metsalu et al., 201562 Metsalu et al., 201562 Other Antibiotic Antimycotic Thermo Fisher Scientific Cat# 15240096 DMEM Lonza Cat# BE12-709F Glutamax Thermo Fisher Scientific Cat# 35050061 RPMI 1640 with L-Glutamine Lonza Cat# BE12-702F IMDM Thermo Fisher Scientific Cat# 12440061 Dulbecco’s Phosphate Buffered Saline Merck Cat# 8537 Human AB serum Merck Cat# H4522 XF RPMI Medium pH 7.4 Agilent Seahorse Cat# 103576-100 XF 1.0 M Glucose solution Agilent Seahorse Cat# 103577-100 XF 100 mM Pyruvate solution Agilent Seahorse Cat# 103578-100 XF 200 mM Glutamine solution Agilent Seahorse Cat# 103579-100 XFe96/XF Pro PDL FluxPak Mini Agilent Seahorse Cat# 103798-100 Oligomycin A Santa Cruz Biotechnology Cat# 579-13-5 (Continued on next page) e5 Cell Reports Medicine 5, 101827, November 19, 2024 Article ll OPEN ACCESS
Control:Article Title: Solid tumor immunotherapy using NKG2D-based adaptor CAR T cells
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER SFG NKG2D/Dap10(Tr.)-CD28 CD3z This manuscript N/A RFP/ffLuc This lab (Lamprecht et al., 201051) Lamprecht et al., 201051 RD114 Gift of Prof. M. Collins, University College London N/A pEQ-Pam3 Gift of Dr. M. Pulé, University College London N/A Software and algorithms FACSDiva BD Biosciences N/A CytExpert Beckman Coulter N/A FlowJo FlowJo, LCC, BD Biosciences N/A Seahorse Analytics Program Agilent Technologies N/A MARS Data Analysis Software BMG Labtech N/A BMG Labtech Control Software BMG Labtech N/A GraphPad Prism version 5.0, 6.0 and 7.0 GraphPad software N/A Excel for Mac 2011 Microsoft N/A Living Image Software PerkinElmer N/A R (version 4.2.1) R Core Team N/A Fiji Fiji Downloads N/A Gene Designer Atum Incorporated N/A Signal Predict DTU Health Tech N/A Tandem Repeats Finder Benson, 199952 Benson, 199952 Spice Roederer et al., 201153 Roederer et al., 201153 Salmon (version 1.9.0) Patro et al., 201754 Patro et al., 201754 R package tximeta Love et al., 2019 PPR: PPR93747 R package trimmomatic Bolger et al., 201455 Bolger et al., 201455 HISAT Kim et al., 201556 Kim et al., 201556 HTSeq Anders et al., 201557 Anders et al., 201557 DESeq2 Love et al., 201458 Love et al., 201458 Ensembl Martin et al., 202359 Martin et al., 202359 MSigDB Liberzon et al., 201560 Liberzon et al., 201560 GSEA Subramanian et al., 200561 Subramanian et al., 200561 R package pheatmap Raivo Kolge, 2019 N/A R package ggplot2 Hadley Wickham, 2016 N/A ClustVis Metsalu et al., 201562 Metsalu et al., 201562 Other Antibiotic Antimycotic Thermo Fisher Scientific Cat# 15240096 DMEM Lonza Cat# BE12-709F Glutamax Thermo Fisher Scientific Cat# 35050061 RPMI 1640 with L-Glutamine Lonza Cat# BE12-702F IMDM Thermo Fisher Scientific Cat# 12440061 Dulbecco’s Phosphate Buffered Saline Merck Cat# 8537 Human AB serum Merck Cat# H4522 XF RPMI Medium pH 7.4 Agilent Seahorse Cat# 103576-100 XF 1.0 M Glucose solution Agilent Seahorse Cat# 103577-100 XF 100 mM Pyruvate solution Agilent Seahorse Cat# 103578-100 XF 200 mM Glutamine solution Agilent Seahorse Cat# 103579-100 XFe96/XF Pro PDL FluxPak Mini Agilent Seahorse Cat# 103798-100 Oligomycin A Santa Cruz Biotechnology Cat# 579-13-5 (Continued on next page) e5 Cell Reports Medicine 5, 101827, November 19, 2024 Article ll OPEN ACCESS
Saline:Article Title: Solid tumor immunotherapy using NKG2D-based adaptor CAR T cells
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER SFG NKG2D/Dap10(Tr.)-CD28 CD3z This manuscript N/A RFP/ffLuc This lab (Lamprecht et al., 201051) Lamprecht et al., 201051 RD114 Gift of Prof. M. Collins, University College London N/A pEQ-Pam3 Gift of Dr. M. Pulé, University College London N/A Software and algorithms FACSDiva BD Biosciences N/A CytExpert Beckman Coulter N/A FlowJo FlowJo, LCC, BD Biosciences N/A Seahorse Analytics Program Agilent Technologies N/A MARS Data Analysis Software BMG Labtech N/A BMG Labtech Control Software BMG Labtech N/A GraphPad Prism version 5.0, 6.0 and 7.0 GraphPad software N/A Excel for Mac 2011 Microsoft N/A Living Image Software PerkinElmer N/A R (version 4.2.1) R Core Team N/A Fiji Fiji Downloads N/A Gene Designer Atum Incorporated N/A Signal Predict DTU Health Tech N/A Tandem Repeats Finder Benson, 199952 Benson, 199952 Spice Roederer et al., 201153 Roederer et al., 201153 Salmon (version 1.9.0) Patro et al., 201754 Patro et al., 201754 R package tximeta Love et al., 2019 PPR: PPR93747 R package trimmomatic Bolger et al., 201455 Bolger et al., 201455 HISAT Kim et al., 201556 Kim et al., 201556 HTSeq Anders et al., 201557 Anders et al., 201557 DESeq2 Love et al., 201458 Love et al., 201458 Ensembl Martin et al., 202359 Martin et al., 202359 MSigDB Liberzon et al., 201560 Liberzon et al., 201560 GSEA Subramanian et al., 200561 Subramanian et al., 200561 R package pheatmap Raivo Kolge, 2019 N/A R package ggplot2 Hadley Wickham, 2016 N/A ClustVis Metsalu et al., 201562 Metsalu et al., 201562 Other Antibiotic Antimycotic Thermo Fisher Scientific Cat# 15240096 DMEM Lonza Cat# BE12-709F Glutamax Thermo Fisher Scientific Cat# 35050061 RPMI 1640 with L-Glutamine Lonza Cat# BE12-702F IMDM Thermo Fisher Scientific Cat# 12440061 Dulbecco’s Phosphate Buffered Saline Merck Cat# 8537 Human AB serum Merck Cat# H4522 XF RPMI Medium pH 7.4 Agilent Seahorse Cat# 103576-100 XF 1.0 M Glucose solution Agilent Seahorse Cat# 103577-100 XF 100 mM Pyruvate solution Agilent Seahorse Cat# 103578-100 XF 200 mM Glutamine solution Agilent Seahorse Cat# 103579-100 XFe96/XF Pro PDL FluxPak Mini Agilent Seahorse Cat# 103798-100 Oligomycin A Santa Cruz Biotechnology Cat# 579-13-5 (Continued on next page) e5 Cell Reports Medicine 5, 101827, November 19, 2024 Article ll OPEN ACCESS
|
GraphPad Software Inc is a verified supplier 